RetrogeneDB ID: | retro_tbel_2951 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_125130:9381..9695(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 83.18 % |
Parental protein coverage: | 85.37 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEM-GTPDVRIDTRLNKAVWA |
KGGEKK.G.SAINEVVTREYTINIHK.IHG..FKK.APRALKEI.KFAMKEM.GTPDVRID.RLNKAVWA | |
Retrocopy | KGGEKK-GHSAINEVVTREYTINIHKHIHGASFKKHAPRALKEIQKFAMKEM>GTPDVRIDPRLNKAVWA |
Parental | KGIRNVPYRIRVRLS-RKRNEDEDSPNKLYTLVTYVP |
KGIR.V.Y.I..RLS..K.NE.EDSPNKLYTLVTYVP | |
Retrocopy | KGIRTVSY*IHMRLS>KKQNEGEDSPNKLYTLVTYVP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |