RetrogeneDB ID: | retro_tbel_1414 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_463:39866..40193(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 80.18 % |
Parental protein coverage: | 88.62 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | KKGR-SAINEVVTR-EYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIR |
KKGR.SAIN.VVTR.E.TINIH...HGVGFKKR.PRAL.EIRKFA.K.MGTPD.RIDT..NKAVWAKGIR | |
Retrocopy | KKGR>SAINKVVTR<EHTINIHNCVHGVGFKKRVPRALREIRKFAVKQMGTPDARIDTGFNKAVWAKGIR |
Parental | NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQT |
N.PY.IRV.LSRKRN.D.DSPNK.YTLVTYVPVTT.KNLQ. | |
Retrocopy | NIPYGIRVWLSRKRNKDKDSPNKFYTLVTYVPVTTLKNLQS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |