RetrogeneDB ID: | retro_tbel_1423 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4663:40779..41107(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 73.04 % |
Parental protein coverage: | 91.87 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | PAKKGGEKKKGRSAINEVV-TREYTINIHKR-IHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
P..KGGEK....S.I..VV..R.YTI.IHK...HGVGFKK..P.ALKEI.KF..K.MGTPDV.I.TRLNK | |
Retrocopy | PTEKGGEKSL--STIKQVV<ARGYTIDIHKC<LHGVGFKKCVPWALKEIWKFTLK-MGTPDVCINTRLNK |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK |
A.W.KGIRNVPY...VRLSRKRNEDEDSPNKLYTLVTYVPVTTF. | |
Retrocopy | AIWTKGIRNVPYCVCVRLSRKRNEDEDSPNKLYTLVTYVPVTTFE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |