RetrogeneDB ID: | retro_tbel_2233 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_106342:6057..6423(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 84.55 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
P.K..GEKKKGRSAIN..VT.E.TINIHK.IHG.GFKKRAP.ALK.I.KFAMKEM.TPDVRIDTRLNKAV | |
Retrocopy | PTKNDGEKKKGRSAINKTVTWEDTINIHKHIHGMGFKKRAPWALK-IWKFAMKEMETPDVRIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
.AKGIRN.PYRIRV.LSRK.NEDEDSPNKLY.LVTYVPVTTFKN.QTVNVDEN | |
Retrocopy | *AKGIRNIPYRIRVWLSRK*NEDEDSPNKLYPLVTYVPVTTFKN*QTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |