RetrogeneDB ID: | retro_tbel_4297 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_75815:5972..6323(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 85.59 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGGEKK.GRSAINEVVT.EY.INIHKRIHGVGF.KRAP.ALKEI.KFAM.EMG.PDV.I.TRLNKA. | |
Retrocopy | PAKKGGEKK-GRSAINEVVTWEYSINIHKRIHGVGFRKRAPQALKEIQKFAMEEMGAPDVCIETRLNKAA |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
WAKGIRNVPYRIRV.LSRK.N.DEDSPNKLYTLVTYVPVTTFK.LQ.. | |
Retrocopy | WAKGIRNVPYRIRVWLSRK*N*DEDSPNKLYTLVTYVPVTTFKHLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |