RetrogeneDB ID: | retro_tbel_131 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1226:116717..116988(+) | ||
Located in intron of: | ENSTBEG00000010505 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 81.52 % |
Parental protein coverage: | 73.98 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID-TRLNKAV |
A..GGEKK.G.SAIN.VV..EYTIN.HK.IHGVGFKK..PRAL.EIRKF.MKEMGTPDVRID.TRLNKAV | |
Retrocopy | ANEGGEKK-GCSAINKVVIWEYTINAHKHIHGVGFKKHGPRALREIRKFSMKEMGTPDVRID>TRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNE |
WAKGIRNVPY.I.VRLSRKRN. | |
Retrocopy | WAKGIRNVPYSICVRLSRKRNK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |