RetrogeneDB ID: | retro_tbel_4646 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_95842:7..360(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 85.83 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAP-RALKEIRKFAM-KEMGTPDVRIDTRLNK |
P..KGGEKKKGRS.INEV..REYTINIHKRIHGVGFKKRAP.RALKEIRKFAM.K..G....RIDTRLNK | |
Retrocopy | PQRKGGEKKKGRSVINEVLIREYTINIHKRIHGVGFKKRAP>RALKEIRKFAM>KRWGL-QIRIDTRLNK |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
AVWAKGIRNVPY.IRVRLSRKRNEDEDS.NKLYTLVTYVPVTTFKNLQ.. | |
Retrocopy | AVWAKGIRNVPYGIRVRLSRKRNEDEDSLNKLYTLVTYVPVTTFKNLQSI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |