RetrogeneDB ID: | retro_tbel_1597 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5189:327305..327640(+) | ||
Located in intron of: | ENSTBEG00000003425 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 83.62 % |
Parental protein coverage: | 93.5 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAK.G....KGRSA.N.VVTREYTINIHKRIHG.GFKKRAPR.L.EI.KFAMKEMGTPDVRIDT.LNKAV | |
Retrocopy | PAKSG---EKGRSAKNKVVTREYTINIHKRIHGMGFKKRAPRGLREIWKFAMKEMGTPDVRIDTKLNKAV |
Parental | WAKGI-RNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNL |
W.KGI.R.VP..IRV.LSRK.NEDEDSPNKLYTLVTYVPVTTFKNL | |
Retrocopy | WVKGI<RDVPHQIRVWLSRKQNEDEDSPNKLYTLVTYVPVTTFKNL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |