RetrogeneDB ID: | retro_tbel_3425 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_139945:25159..25496(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 88.6 % |
Parental protein coverage: | 91.87 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPR-ALKEIRKFAMKEMGTPDVRIDTRLNKA |
P.KKGGEKK.GRSAINEVVTREYTI.IHKRIHGVGFKK.APR.ALKEIRKFAMKEMG.PDVRIDTRLNKA | |
Retrocopy | PTKKGGEKK-GRSAINEVVTREYTIDIHKRIHGVGFKKHAPR>ALKEIRKFAMKEMGAPDVRIDTRLNKA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK |
VWA.G.RN.PYRIRVR.SRK.NEDEDS.NKLYTLVT.VPVTTFK | |
Retrocopy | VWARGKRNGPYRIRVRSSRKQNEDEDSLNKLYTLVTCVPVTTFK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |