RetrogeneDB ID: | retro_tbel_1266 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4272:53090..53398(-) | ||
Located in intron of: | ENSTBEG00000004231 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 63.55 % |
Parental protein coverage: | 86.18 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
P.KKG.EKK........VVT.EYTI.IH..IHG.GF.K.AP.A.KEI.KFAM.EMG.PDVRIDTRLN... | |
Retrocopy | PIKKGDEKKSVLPSM--VVTQEYTISIHQHIHGRGFRKGAPWARKEIMKFAM-EMGIPDVRIDTRLNTPA |
Parental | WAKGIRNVPYRIRVRLSR-KRNEDEDSPNKLYTLVTY |
..KG.R.....I.V.LSR.K.NE.EDSPNKLY.LVTY | |
Retrocopy | RTKGPRHILHCIHVQLSR<KCNEHEDSPNKLYALVTY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |