RetrogeneDB ID: | retro_tbel_1129 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3918:587322..587669(+) | ||
Located in intron of: | ENSTBEG00000016117 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 82.05 % |
Parental protein coverage: | 94.31 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI-DTRLNKA |
PAKKGGEKKKG.SAINEV.TREYTINIHKRIHG..FKK.AP..L.EI..FAMKEMGTPDV...DTR.N.A | |
Retrocopy | PAKKGGEKKKGGSAINEVATREYTINIHKRIHGMSFKKCAPQTLREIQTFAMKEMGTPDVHM<DTRINTA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQ |
VWAKGIRNVPYRI.V.LSRK.NEDED.P.KLYTLVTYVP.TTFKNLQ | |
Retrocopy | VWAKGIRNVPYRI*VQLSRKHNEDEDLPDKLYTLVTYVPITTFKNLQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |