RetrogeneDB ID: | retro_tbel_1802 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5777:30735..31101(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 86.18 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGGEKK.G.SAINE.VT.EYTI.IHK.IHG.GFKKR.P.ALKEIRKFAMKEMGTPDVR.DTRLN..V | |
Retrocopy | PAKKGGEKK-GHSAINEAVTLEYTIDIHKHIHGMGFKKRTPWALKEIRKFAMKEMGTPDVRVDTRLNTVV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
WAK.I.NVPYRI.VRLSRK.NEDE.SPNKLYTLVTYVPVTTFKNLQTVNVDEN | |
Retrocopy | WAKRIGNVPYRIHVRLSRK*NEDENSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |