RetrogeneDB ID: | retro_tbel_4247 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_73171:7863..8206(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 65. % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
P.KK.GEK..G.SAIN..VT.E.TINIHK.IHG.GFKK.AP.ALKEI.KFAMKEMG.PDV.IDTRLNK.V | |
Retrocopy | PTKKYGEKM-GHSAINKMVTWE*TINIHKHIHGMGFKKCAPWALKEI*KFAMKEMGAPDVHIDTRLNKVV |
Parental | WAKGIRNVP-YRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTF-KNLQTV |
WAKG..............R...E...SPNK.YTLVTYVPVTT..KNLQ.. | |
Retrocopy | WAKGTSHIE<IHVQLSRKRNEDE--GSPNKFYTLVTYVPVTTL<KNLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |