RetrogeneDB ID: | retro_tbel_577 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2467:519348..519678(+) | ||
Located in intron of: | ENSTBEG00000010738 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 75.86 % |
Parental protein coverage: | 91.87 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | AKKGGEKKKGRSAINEVVT-REYTINIHKRIHGVGFKK-RAPRALKEIRKFAMKEMGTPDVRIDTRL-NK |
AKKGGEKK.GRS.I.EVVT.R.YTINIHK.IHG.GF.K...P.AL..I.K.AMKEMGTP.V..DTRL..K | |
Retrocopy | AKKGGEKK-GRSVISEVVT<RKYTINIHKHIHGLGFRK<MCPQALT-IQKLAMKEMGTPEVLMDTRL<HK |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKN |
AVWA.GIRN.PYRI.VRLSRKRNEDEDSPNKLY.LV..VPV.TFKN | |
Retrocopy | AVWATGIRNFPYRICVRLSRKRNEDEDSPNKLYALVADVPVITFKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |