RetrogeneDB ID: | retro_tbel_2159 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_102865:1307..1592(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 67.37 % |
Parental protein coverage: | 77.24 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRN |
KK...SA...VVT.EYTINIHK.IHGVGFKK.AP..LKEI.KFAMKEMGTPDV.I.T.L.K.V..KGIRN | |
Retrocopy | KKGCHSALKKVVTQEYTINIHKAIHGVGFKKCAPQPLKEIWKFAMKEMGTPDVWINTKLSKVVSIKGIRN |
Parental | VPYRIRVRLSRKRNEDEDSPNKLYT |
..Y.I.V.LSRK.N...DS.NK.Y. | |
Retrocopy | SLYHIHVWLSRKLNKVDDSANKCYS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |