RetrogeneDB ID: | retro_tbel_3292 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_13635:4237..4525(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 86.46 % |
Parental protein coverage: | 78.05 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
P.KKGGEKKKG.SAINEVVT.E.TINIHK.IHGVGF.KR.P.ALKEI..FAMKEMGTPDV.IDTRLNKAV | |
Retrocopy | PTKKGGEKKKGHSAINEVVTQENTINIHKHIHGVGFEKRIPQALKEIQEFAMKEMGTPDVLIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDS |
WAKGIRNVPYRIRV.LSRK.NEDEDS | |
Retrocopy | WAKGIRNVPYRIRV*LSRKQNEDEDS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |