RetrogeneDB ID: | retro_tbel_1195 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4066:247489..247833(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 76.27 % |
Parental protein coverage: | 95.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMG-TPDVRIDTRLNKA |
P..KGG.KKKG.S..NEV...EYTI..HK.IHGVGFKK.AP.AL.EI.KFAMKEMG.TPDV.IDT..NKA | |
Retrocopy | PQIKGG-KKKGCSS-NEVMNWEYTIDNHKHIHGVGFKKHAPQALREIQKFAMKEMG<TPDVHIDTKFNKA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQT |
VWAKGIR..PY.I.V.LSR.RNEDED.P.KLYTLVTYVPVTTFKNLQT | |
Retrocopy | VWAKGIRIIPY*ICVQLSRNRNEDEDLPYKLYTLVTYVPVTTFKNLQT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |