RetrogeneDB ID: | retro_tbel_3618 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_1467:168293..168647(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 56.45 % |
Parental protein coverage: | 98.37 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEI-RKFAMKEMG-TPDVRIDTRLNKAV |
..GGE.K.GR....EVV.R........R..G.GF.KRA..A...I.RKF..KE.G.TP.V..DTRL..A. | |
Retrocopy | REGGEEK-GRPTRREVVPRTHRRHL-QRTQGLGFQKRASWAHRDI<RKFSRKERG<TPEVHTDTRLSTAI |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK-NLQTVNVDEN |
WAKG.R..P..I..R.SRKR.ED.DSP..LYTLVT.VPVTTF..NLQ.V.VDEN | |
Retrocopy | WAKGVRPIPN*ICARVSRKRHEDGDSPSELYTLVTCVPVTTFE<NLQIVDVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |