RetrogeneDB ID: | retro_tbel_3775 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_15169:2595..2965(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 75. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKK.G..KKG.SAINEV.T..YTI.IHKRIH..GF.K.AP.AL.EI.KF.MKEMG.PDVRI.TRLNKAV | |
Retrocopy | PAKKDGDNKKGCSAINEVLTQDYTISIHKRIHNMGFQKCAPWALREI*KFSMKEMGSPDVRIETRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDS-PNKLYTLVTYVPVTTFKNLQTVNVDEN |
W.K....VPYRI.V.LSRK..EDEDS.PNKLYTLVTYVPVTTFK.LQ.V.VDEN | |
Retrocopy | WVKE*EFVPYRICVWLSRKHKEDEDS>PNKLYTLVTYVPVTTFKSLQIVHVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |