RetrogeneDB ID: | retro_tbel_1768 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5684:66138..66476(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 73.33 % |
Parental protein coverage: | 94.31 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | KKGGEKKKGRSA-INEVVTREY-TINIHKR-IHGVGFKKRA-PRALKEIRKFAMKEMGTPDVRIDTRLNK |
KKGG..KKGRS..I.EVV.R...TINIHK...HGVG.KK.A.PRALK.I..FAMKEMGTPDVRIDTRL.. | |
Retrocopy | KKGG--KKGRSP<ISEVVSRDA<TINIHKA<MHGVGCKKHA<PRALKDIWEFAMKEMGTPDVRIDTRLHT |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
A..AKG.RN.PYRI.V.LSRKRNEDEDSPN.L.T.VT.VPVTTFKNLQ.. | |
Retrocopy | AAPAKGVRNIPYRIPVQLSRKRNEDEDSPNELCTQVTCVPVTTFKNLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |