RetrogeneDB ID: | retro_tbel_337 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1802:869226..869577(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 85.47 % |
Parental protein coverage: | 95.12 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKG.EKKKGRSAINEVVT.E.TINIHK.I.GVGFKK.APRA.KEIRKFAMKEMGTPDV.IDTRLNKAV | |
Retrocopy | PAKKGDEKKKGRSAINEVVTQEHTINIHKCIQGVGFKKGAPRAPKEIRKFAMKEMGTPDVCIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQT |
WAKGIR...Y.I....SRKRN.DEDSPNKLYTLVTYVPVTTFKNLQT | |
Retrocopy | WAKGIRDTLYQIHAQFSRKRNKDEDSPNKLYTLVTYVPVTTFKNLQT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |