RetrogeneDB ID: | retro_tbel_3028 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_126981:69235..69580(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 85.95 % |
Parental protein coverage: | 98.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWA |
KKG...KKG.SA.NEVVT.EYTINIHKRIHG.GFKKRAPRALKEI.KFAMKE.GTPDVRIDTRL.KAVWA | |
Retrocopy | KKGS--KKGCSATNEVVTCEYTINIHKRIHGMGFKKRAPRALKEIWKFAMKETGTPDVRIDTRLSKAVWA |
Parental | KGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
KGIRNVPYR.....SRKRNEDEDSPN.LYTLVTYVPVT.FKNLQTVNVDEN | |
Retrocopy | KGIRNVPYRL----SRKRNEDEDSPNELYTLVTYVPVTSFKNLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |