RetrogeneDB ID: | retro_tbel_2140 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_101861:4204..4537(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 84.68 % |
Parental protein coverage: | 90.24 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKK.GEKKKG.S.INEVV.REYTINIHK.I.GVGFKK.AP.ALKEIRKFAMKEMGTPDV.IDTRLNKAV | |
Retrocopy | PAKKDGEKKKGHSTINEVVAREYTINIHKHIRGVGFKKCAP*ALKEIRKFAMKEMGTPDVHIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTT |
WAKGIRNV.Y.I.V.LSRK.NE.E.SPN.LYTLVTYVPVTT | |
Retrocopy | WAKGIRNVLY*ICVWLSRKQNEGENSPNELYTLVTYVPVTT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |