RetrogeneDB ID: | retro_tbel_626 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2593:136998..137340(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 85.96 % |
Parental protein coverage: | 91.06 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYR |
RSAINEVVT.EYTINIHKRIHG..FKK.AP..LKEI.KFAMKEMGTPDVRIDTRLN.AVWAKGIRNVPYR | |
Retrocopy | RSAINEVVTQEYTINIHKRIHGMCFKKCAPQELKEIWKFAMKEMGTPDVRIDTRLNQAVWAKGIRNVPYR |
Parental | IRV--RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
IRV..RLSRK.N.DEDSPNKLYTLVT.VPVTTFKNLQ.V..DEN | |
Retrocopy | IRVRLRLSRK*NKDEDSPNKLYTLVTHVPVTTFKNLQSVSMDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |