RetrogeneDB ID: | retro_tbel_1611 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5238:56301..56562(-) | ||
Located in intron of: | ENSTBEG00000005646 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 67.05 % |
Parental protein coverage: | 71.54 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PA.K.G.KKKGRSAI...VT..YTINIHK...G.GFKK.AP..L.EI.KFAMK.M.TPDV..DTRLNK.. | |
Retrocopy | PARKCG-KKKGRSAITKLVTQKYTINIHKHLYGMGFKKYAPQGLIEIQKFAMKKMETPDVCTDTRLNKTG |
Parental | WAKGIRNVPYRIRVRLSR |
WAKGIR...YRI.V.L.R | |
Retrocopy | WAKGIRDISYRICVQLNR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |