RetrogeneDB ID: | retro_tbel_2625 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_114420:110409..110771(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 76.23 % |
Parental protein coverage: | 98.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWA |
KK.G.KKKG.SA.NE.VT.EYTINIHKRIHGV.FKK..P.ALKEI..F..K.MG.PDV..DT.LNKAVWA | |
Retrocopy | KKDGKKKKGHSAVNEAVTQEYTINIHKRIHGVDFKKCDPQALKEIQRFSIKCMGAPDVHSDTMLNKAVWA |
Parental | KGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLV-TYVPVTTFKNLQTVNVDEN |
.GIRN.PYRI.V.LSRK.NEDEDSPNKLYTLV...VPVTTF.NLQTVN.DEN | |
Retrocopy | EGIRNIPYRICVWLSRKQNEDEDSPNKLYTLV<DLVPVTTFENLQTVNMDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |