RetrogeneDB ID: | retro_tbel_2341 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_109219:84324..84612(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 68.75 % |
Parental protein coverage: | 78.05 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIR |
...KG.SA..EVVTREYTIN.HK..HG.GFKK.AP.ALKEIRKFA..EM.T.DV.IDT.LNK..W.KGIR | |
Retrocopy | DSEKGHSALKEVVTREYTINTHKHTHGMGFKKCAPQALKEIRKFAKEEMRTLDVCIDTSLNKVIWIKGIR |
Parental | NVPYRIRVRLSRKRNEDEDSPNKLYT |
N..Y.I.V.LSRK.NEDEDS.NK.Y. | |
Retrocopy | NSLYHIHVWLSRKLNEDEDSSNKCYS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |