RetrogeneDB ID: | retro_tbel_4161 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_69367:4158..4490(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 79.46 % |
Parental protein coverage: | 89.43 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID-TRLNKAV-WAKGIR |
KKG..AINEVVTREYT.NIHK.IH.VGFKK.AP.ALKEI.K.AMK.MGTPDVRI..TRLNKA..WAK.IR | |
Retrocopy | KKGHCAINEVVTREYTFNIHKCIHNVGFKKHAPPALKEIQKSAMKKMGTPDVRIG>TRLNKAI>WAKAIR |
Parental | NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
NVP..I.V.LSRK.NEDEDSPNKL.TLVTYVPVTTFKNLQ.. | |
Retrocopy | NVPHGIHVQLSRKLNEDEDSPNKLCTLVTYVPVTTFKNLQAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |