RetrogeneDB ID: | retro_tbel_3846 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_23369:335..698(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 64.46 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALK---EIRKFAMKEMGTPDVRIDTRLN |
P.KKG..KKKG.SAIN.VVTRE.TINIHK.....G.....P.......EI.K...KEMGT.DVRIDTRLN | |
Retrocopy | PTKKGSKKKKGPSAINKVVTREDTINIHKAHPLCGLQETRPSGTQRNPEI*KR*KKEMGTLDVRIDTRLN |
Parental | KAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
KAVWAKGIR.....I.V.LSRK...DEDS.NKLYTL.T.VPVTTFKNLQ.. | |
Retrocopy | KAVWAKGIRTIA*NIHVQLSRK*SKDEDSSNKLYTLLTSVPVTTFKNLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |