RetrogeneDB ID: | retro_tbel_718 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2830:33515..33878(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 81.3 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
P.KKGG.KKKG.SAINEV.TR.YTINIHKRIHGV.F...AP.A.KEI.KF.MKEMGTPDVRIDTRLNK.V | |
Retrocopy | PTKKGG-KKKGCSAINEV-TRKYTINIHKRIHGVSFERHAPWAIKEIQKFSMKEMGTPDVRIDTRLNKVV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
.AKGI.N.PYRI...LSRK.NEDEDSPNKLYTLVTYVP.TTFKNLQTVN.DEN | |
Retrocopy | *AKGIGNTPYRICEQLSRKQNEDEDSPNKLYTLVTYVPITTFKNLQTVNADEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |