RetrogeneDB ID: | retro_tbel_872 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3202:414301..414669(+) | ||
Located in intron of: | ENSTBEG00000008529 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 70.97 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVT-REYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKA |
P......KK.G..........R...INIHKRIHGVGFKKRA.RALKEIRKF.MKEMGTP.V..DT.LNKA | |
Retrocopy | PGRMAPAKKGGEKKGRSAIN<RGGAINIHKRIHGVGFKKRASRALKEIRKFVMKEMGTPEVHVDTGLNKA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
VWAKGIRNV.Y.I.V.L.RKRNEDED.PNKLYTLVTYVPVT.FKNL.TV..DEN | |
Retrocopy | VWAKGIRNVLYHIHVQLFRKRNEDEDTPNKLYTLVTYVPVTPFKNL*TVDGDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |