RetrogeneDB ID: | retro_tbel_891 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3257:229007..229370(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 92.62 % |
Parental protein coverage: | 99.19 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW |
AKKGG.KKKGRSAINEVVTREYTINIHKRIHGVG.KKRAPRALKEI.KFAM.EMGTPDV.IDTRLNKAVW | |
Retrocopy | AKKGG-KKKGRSAINEVVTREYTINIHKRIHGVGLKKRAPRALKEIWKFAMREMGTPDVLIDTRLNKAVW |
Parental | AKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
AKGIR.VPYRI.V.LSRK.NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN | |
Retrocopy | AKGIRKVPYRIHVQLSRK*NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |