RetrogeneDB ID: | retro_tbel_1605 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5205:53821..54169(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 93.16 % |
Parental protein coverage: | 95.12 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGGEKK.GRSAI.EVVTREYT.NIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV.ID.RLNKAV | |
Retrocopy | PAKKGGEKK-GRSAITEVVTREYTNNIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVHIDARLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQT |
WA.GIRNVPYRIRVRLSRKRNEDEDSP.KLYTLVT.VPVTTFKNLQT | |
Retrocopy | WARGIRNVPYRIRVRLSRKRNEDEDSPHKLYTLVTCVPVTTFKNLQT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |