RetrogeneDB ID: | retro_tbel_3580 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_145118:23207..23519(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 89.62 % |
Parental protein coverage: | 86.18 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW |
A.KGGEKKKGRSAINEVVT.EYTINI..RIHG.GFKKRAPRALKE..KFAMKEMGTPDV.IDTRLNKAV. | |
Retrocopy | ARKGGEKKKGRSAINEVVTQEYTINI--RIHGMGFKKRAPRALKESQKFAMKEMGTPDVHIDTRLNKAVR |
Parental | AKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYV |
AKGIR.VPY.IRVRLSRKRNEDEDSPNKLYTLVTYV | |
Retrocopy | AKGIRHVPYQIRVRLSRKRNEDEDSPNKLYTLVTYV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |