RetrogeneDB ID: | retro_tbel_908 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3280:243910..244253(-) | ||
Located in intron of: | ENSTBEG00000005195 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 71.19 % |
Parental protein coverage: | 93.5 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNV |
..G.SAINEV...EYTIN..K.IHG.GFKKRAPR.LKEI.KFA.KE..TP.V.IDTRL.K..WAKGIRNV | |
Retrocopy | REGSSAINEVMPQEYTINTDKCIHGMGFKKRAPRNLKEIWKFATKETVTPEVHIDTRLSKPFWAKGIRNV |
Parental | PYRIRVR-LSRKRNEDEDSPNKLYTLVTYVP-VTTF-KNLQTVNVDEN |
PY.I.V..L.RK.N.DEDSP.KLYTLVT.VP..TTF.K.L.TVNVDEN | |
Retrocopy | PYGICVH<LARK*N-DEDSPSKLYTLVT*VP>LTTF>KHLHTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |