RetrogeneDB ID: | retro_tbel_3061 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_128720:22717..23077(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 69.84 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | PAKKGGEKKKGRSAIN-EVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKA |
PAKKGG..KKG.SAIN..VVT.E.T.NIH..IHG..FKKRA..ALKEI.KFAM.E.G.PDV.ID.RLN.A | |
Retrocopy | PAKKGG--KKGHSAIN<QVVTWEHTVNIHRHIHGTVFKKRALQALKEIWKFAMRETGNPDVHIDARLNTA |
Parental | VWAKGIRNVPYRIRV-RLSRKRNEDEDSPNKLYTLVTYVPVTTFK-NLQTVNVDEN |
VWAKGI.NVPY.I.V...SRK..E.ED.PNK.Y.LV..VP.TTFK.NLQ.VNVDEN | |
Retrocopy | VWAKGIANVPYCIHV<VMSRKCDENEDLPNKFYFLVICVPITTFK<NLQAVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |