RetrogeneDB ID: | retro_tbel_4235 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_72749:3920..4289(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 85.37 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
P.KKGGEKKKG.SAI.EVVT.EY.INIHK.IHGVGFKK.APRALKE..KFAMKEM.TPDVRIDTRLNKAV | |
Retrocopy | PTKKGGEKKKGHSAISEVVTLEYAINIHKHIHGVGFKKHAPRALKEVQKFAMKEMETPDVRIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
WAKGIRN.PY.I.V.LSRKRNEDEDSP.KLYTLV.YVP.TTFKNL.TVNVDEN | |
Retrocopy | WAKGIRNAPYQIHVPLSRKRNEDEDSPDKLYTLVAYVPATTFKNLRTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |