RetrogeneDB ID: | retro_tbel_1574 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5116:66818..67169(+) | ||
Located in intron of: | ENSTBEG00000016124 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 85.59 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGG.KK.G.SAINEVVTRE..INIHK.IHGVGFKKRAPRALKEIRKFAMKE.GTPDVRIDTRLNKAV | |
Retrocopy | PAKKGG-KKRGHSAINEVVTREHAINIHKHIHGVGFKKRAPRALKEIRKFAMKERGTPDVRIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
WAKGIRN.PY.I....SRK.NEDEDSPNKLYTLVTYVPVTT.KNLQ.. | |
Retrocopy | WAKGIRNAPY*IHAQFSRKQNEDEDSPNKLYTLVTYVPVTTSKNLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |