RetrogeneDB ID: | retro_tbel_503 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2267:160315..160630(+) | ||
Located in intron of: | ENSTBEG00000015203 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 85.37 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRI |
SAINE......TINIHK.IHG.GFK..AP...K....FAMK.MGTPDV.ID.R..KAVWAK.IR..PY.. | |
Retrocopy | SAINEILIPKHTINIHKSIHGMGFKTCAPEVPKKVWEFAMKKMGTPDVCIDIRFHKAVWAKEIRSIPYHT |
Parental | RVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQT |
.V.LSRK.N.D..SPNKLYTLVTYVPVTTFK.LQ. | |
Retrocopy | HV*LSRKHNKDKESPNKLYTLVTYVPVTTFKTLQS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |