RetrogeneDB ID: | retro_tbel_3873 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_25436:637..987(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 82.35 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTR-EYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKA |
PAKKGGEKK.GRSAIN.VVTR.E.TINIH...HGVGFKKR.PRAL.EIRKFAMK.MGTPD.RIDT..NKA | |
Retrocopy | PAKKGGEKK-GRSAINKVVTR<EHTINIHNCVHGVGFKKRVPRALREIRKFAMKQMGTPDARIDTGFNKA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
VWAKGIRN.P..IRV.LSRKRN.D.DSPNK.YTLVTYVPVTT.KNLQTV | |
Retrocopy | VWAKGIRNIPNGIRVWLSRKRNKDKDSPNKFYTLVTYVPVTTLKNLQTV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |