RetrogeneDB ID: | retro_tbel_1915 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5989:137401..137768(+) | ||
Located in intron of: | ENSTBEG00000002615 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 82.26 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKK.G.KKKGRSAINEVVT..YTINIHK.IHG.GFKKRAP.ALKEIRKFAMKEMGTP.VRIDTRL.KAV | |
Retrocopy | PAKKSG-KKKGRSAINEVVTQ*YTINIHKHIHGMGFKKRAPWALKEIRKFAMKEMGTPGVRIDTRLKKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK-NLQTVNVDEN |
.AKGIRNVPYRIRV.LSRK.N.DEDSP..LYTL.TYVPV.TF..NL.TV..DEN | |
Retrocopy | RAKGIRNVPYRIRVQLSRKQNKDEDSPTNLYTLMTYVPVITFR>NLRTVSMDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |