RetrogeneDB ID: | retro_tbel_1226 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_415:131448..131750(+) | ||
Located in intron of: | ENSTBEG00000017022 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 80.39 % |
Parental protein coverage: | 82.11 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPR-ALKEIRKFAMKEMGTPDVRIDTRLNKA |
P..KGG..KKG.SAINEVVTREYTINIHK.IHGVGFKK.A.R.ALKE..KFAMKEMGTPDV.ID.RLNKA | |
Retrocopy | PT*KGGKNKKGHSAINEVVTREYTINIHKCIHGVGFKKHALR<ALKETWKFAMKEMGTPDVHIDNRLNKA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLY |
VWAKGIRNVPY..R..LSRKRNE.E.SPNKL. | |
Retrocopy | VWAKGIRNVPYHSRAWLSRKRNEVEVSPNKLW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |