RetrogeneDB ID: | retro_tbel_780 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3007:638709..639078(+) | ||
Located in intron of: | ENSTBEG00000013928 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 89.43 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGGEKKKGRSAI.EVVTREYTINIHKRIHG.GFKKRAPR.L.EIRKFAMKEM.TPDV.IDTR.NKAV | |
Retrocopy | PAKKGGEKKKGRSAISEVVTREYTINIHKRIHGTGFKKRAPRTLEEIRKFAMKEMRTPDVCIDTRFNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
.AKGIRNVPYRI.VRLSRK.NEDEDSPNKLYTLVTYVPVTTF.NLQT.N.DEN | |
Retrocopy | CAKGIRNVPYRIHVRLSRK*NEDEDSPNKLYTLVTYVPVTTFENLQTINGDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |