RetrogeneDB ID: | retro_tbel_246 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1549:444769..445138(+) | ||
Located in intron of: | ENSTBEG00000015383 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 90.24 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGGEKKKGRSAINEVVT.EYTINIHK.IHG.GFK.RAPRALKEI.KFAMKEMGTPDV.IDTRLNKAV | |
Retrocopy | PAKKGGEKKKGRSAINEVVTQEYTINIHKCIHGMGFKIRAPRALKEIQKFAMKEMGTPDVCIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
WAKGIRN.PY.I.V.LSRKRNEDEDSPNKLYTLV.YVPVTTFKNLQ.VNVDEN | |
Retrocopy | WAKGIRNFPY*IHVQLSRKRNEDEDSPNKLYTLVIYVPVTTFKNLQAVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |