RetrogeneDB ID: | retro_tbel_2093 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_959:38962..39267(+) | ||
Located in intron of: | ENSTBEG00000010412 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 83.96 % |
Parental protein coverage: | 85.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KGGEKKKGRSAINE-VVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWA |
KGGE.K.G.S.INE..VT.EYTINIHK.IHG.GFKKRAPRALK.IRKFAMKEMGTP.VRIDTRLNKAVWA | |
Retrocopy | KGGERK-GHS-INE<AVTCEYTINIHKHIHGAGFKKRAPRALKDIRKFAMKEMGTPNVRIDTRLNKAVWA |
Parental | KGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP |
KGIRN.PY.IRVRLS.KRNEDEDSPNKLYT..TY.P | |
Retrocopy | KGIRNDPYQIRVRLSKKRNEDEDSPNKLYTM-TYIP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |