RetrogeneDB ID: | retro_tbel_3154 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_131807:16119..16450(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 90.99 % |
Parental protein coverage: | 89.43 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | AINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIR |
AINEVVT.EYTINIHKRIHG.GFKK.APRALKEI.KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPY.IR | |
Retrocopy | AINEVVTQEYTINIHKRIHGMGFKKCAPRALKEIWKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPY*IR |
Parental | VRLSRKRNEDEDSPNKLYTLVTYVPVTTF-KNLQTVNVDEN |
..LSRKRNEDEDSPNKLYTLVT.VP.TTF.KNLQTVNVDEN | |
Retrocopy | MWLSRKRNEDEDSPNKLYTLVTSVPATTF>KNLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |