RetrogeneDB ID: | retro_tbel_381 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1908:120494..120863(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 76. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEM-GTPDVRIDTRLNKA |
P..KGGEKKKG.SAINEVVTREY.I.IHK.IHG..F....PRALKEI..FAMKEM.GTPDVRIDTR.N.A | |
Retrocopy | PTEKGGEKKKGHSAINEVVTREYAIDIHKSIHGARFQETCPRALKEIQEFAMKEM>GTPDVRIDTRPNNA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTL-VTYVPVTTFKNLQTVNVDEN |
VWAKGIRN.P.RI.VRLS.KRNEDE.SPNKLYTL.VT.VPVTTFKNLQ......N | |
Retrocopy | VWAKGIRNDPHRICVRLSSKRNEDEESPNKLYTL<VTCVPVTTFKNLQPMWIRTN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |