RetrogeneDB ID: | retro_tbel_744 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2922:538478..538848(+) | ||
Located in intron of: | ENSTBEG00000011089 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 84.68 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGGEKKKG.SAIN.VVT.EY.INIHKRIHG.GFKK.A...LKEI.KFA.KEMGTPDV.IDTRLNKAV | |
Retrocopy | PAKKGGEKKKGHSAINKVVTWEYAINIHKRIHGMGFKKCALWTLKEIWKFAIKEMGTPDVHIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRN-EDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
WAKGIRN.PYRI.VRLSRK.N.EDEDS.NKLYTLVTYVPVTTFK.LQ.VNVDEN | |
Retrocopy | WAKGIRNIPYRICVRLSRKLN>EDEDSLNKLYTLVTYVPVTTFKSLQIVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |