RetrogeneDB ID: | retro_tbel_510 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2302:495970..496317(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 82.35 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFK-KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKA |
PAKKGG..KKGRSAINEVVT..YTINIHK..HGVGFK.KR...ALKEI.KFAMKEMGTP.VRIDTRLNKA | |
Retrocopy | PAKKGG--KKGRSAINEVVTQ*YTINIHKCVHGVGFK<KRTSWALKEIQKFAMKEMGTPGVRIDTRLNKA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
VWAKGIRNVPY.IRV.LSRK..EDEDSPNKLYT.VTYVPV.TF.NLQ.. | |
Retrocopy | VWAKGIRNVPYGIRVWLSRKQHEDEDSPNKLYTMVTYVPVITFTNLQSI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |