RetrogeneDB ID: | retro_tbel_3365 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_138453:71245..71596(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 69.42 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | GEKKKGRSAINEVVTREYTIN-IHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKG |
G...K..SAIN.VVT.EYTI..IHK.IHG..FKK.AP.AL..I.KFAMKEM.T.DV.IDTRLNK.VW.KG | |
Retrocopy | GWREKVWSAINKVVTWEYTIR<IHKHIHGMAFKKCAPWALRGIWKFAMKEMETSDVHIDTRLNKVVWTKG |
Parental | IRNVPYRIRVRLSR-KRNEDEDSPNKLYT-LVTYVPVTTFKNLQTVNVDEN |
IRN.PY.IRV.LSR.K.N.DEDSPNKLY..LV.YV.V..F.NLQTVNV..N | |
Retrocopy | IRNNPYHIRVSLSR<KTNKDEDSPNKLYI<LVAYVSVIIFRNLQTVNVAGN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |